Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 AC144831.1-201ENST00000573312 2656 ntBASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 AC002056.1-201ENST00000395613 760 ntBASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 AC074386.1-202ENST00000463561 864 ntBASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 RPL13AP23-201ENST00000480739 586 ntBASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRTM1Q9HBL6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 AC103702.1-201ENST00000548801 2630 ntBASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 PDPK2P-202ENST00000562415 1191 ntBASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 AP002472.1-201ENST00000577490 586 ntBASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 DBET-201ENST00000630918 3363 ntBASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 AC013268.4-201ENST00000637413 2228 ntBASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LRTM1Q9HBL6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRTM1Q9HBL6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms