Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AL691432.1-201ENST00000596308 1422 ntBASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 MST1L-201ENST00000442552 2185 ntBASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 HLA-H-201ENST00000383620 1096 ntBASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 CEND1P1-201ENST00000451006 455 ntBASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 YBX1P5-201ENST00000509441 847 ntBASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AC105339.1-204ENST00000636249 355 ntBASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 AC126177.1-201ENST00000547829 2218 ntBASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDF1Q96CC6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 UXT-AS1-201ENST00000590504 1525 ntBASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 SLC25A39P2-201ENST00000537614 270 ntBASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 AC243562.2-201ENST00000561247 970 ntBASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 AC022145.2-201ENST00000598203 171 ntBASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms