Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 SLC22A20-204ENST00000530038 1673 ntBASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 AC007326.2-201ENST00000624224 7579 ntBASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CYP2A7P1-201ENST00000595391 815 ntBASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 AC020765.3-201ENST00000613051 740 ntBASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 AP001350.2-201ENST00000625104 1094 ntBASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.63□□□□□ -0.23
RTN4IP1Q8WWV3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 LINC02228-204ENST00000642115 2962 ntBASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 HCG4-201ENST00000418983 998 ntBASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 PMS2P1-201ENST00000431037 1228 ntBASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 FDX1P1-201ENST00000449115 551 ntBASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 AC079776.4-201ENST00000511039 504 ntBASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 AC087641.1-201ENST00000557561 1021 ntBASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTN4IP1Q8WWV3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 SSR4P1-203ENST00000599569 2260 ntBASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTN4IP1Q8WWV3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms