Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 COX20P2-201ENST00000452636 358 ntBASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 SNX33P1-201ENST00000592116 1762 ntBASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AC073439.1-201ENST00000624121 1774 ntBASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 HLA-H-201ENST00000383620 1096 ntBASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AC092580.3-201ENST00000430932 139 ntBASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 TSPY16P-201ENST00000449843 468 ntBASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AP002490.2-201ENST00000524791 560 ntBASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 FOXO1B-201ENST00000504678 1527 ntBASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AC126177.1-201ENST00000547829 2218 ntBASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CLDND2Q8NHS1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDND2Q8NHS1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms