Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 AL162727.3-201ENST00000635661 2787 ntBASIC15.1■□□□□ 0.01
NUP43Q8NFH3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 PKD1P5-201ENST00000532415 10291 ntBASIC15.09■□□□□ 0.01
NUP43Q8NFH3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 FAM220BP-201ENST00000377689 816 ntBASIC15.09■□□□□ 0.01
NUP43Q8NFH3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.09■□□□□ 0.01
NUP43Q8NFH3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
NUP43Q8NFH3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUP43Q8NFH3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUP43Q8NFH3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.08■□□□□ 0.01
NUP43Q8NFH3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUP43Q8NFH3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUP43Q8NFH3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.08■□□□□ 0.01
NUP43Q8NFH3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NUP43Q8NFH3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.08■□□□□ 0.01
NUP43Q8NFH3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.08■□□□□ 0
NUP43Q8NFH3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.08■□□□□ 0
NUP43Q8NFH3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 AC134407.2-201ENST00000625089 1978 ntBASIC15.08■□□□□ 0
NUP43Q8NFH3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NUP43Q8NFH3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
NUP43Q8NFH3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.08■□□□□ 0
NUP43Q8NFH3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.08■□□□□ 0
NUP43Q8NFH3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.08■□□□□ 0
NUP43Q8NFH3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.08■□□□□ 0
NUP43Q8NFH3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NUP43Q8NFH3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.08■□□□□ 0
NUP43Q8NFH3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NUP43Q8NFH3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NUP43Q8NFH3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NUP43Q8NFH3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.08■□□□□ 0
NUP43Q8NFH3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 AC011477.6-201ENST00000604980 1927 ntBASIC15.07■□□□□ 0
NUP43Q8NFH3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.07■□□□□ 0
NUP43Q8NFH3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
NUP43Q8NFH3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms