Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIML2Q8N7C3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 AKR1C7P-201ENST00000305623 895 ntBASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 KRT18P27-201ENST00000427733 1299 ntBASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 AF238378.1-201ENST00000526806 358 ntBASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 AC023157.3-201ENST00000619086 2088 ntBASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIML2Q8N7C3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 AP005117.1-202ENST00000581724 1908 ntBASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 AC008667.4-201ENST00000607370 168 ntBASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIML2Q8N7C3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms