Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 AC010491.1-201ENST00000563101 2797 ntBASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC33Q8N5R6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC33Q8N5R6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC33Q8N5R6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
CCDC33Q8N5R6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC33Q8N5R6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 AL158211.3-201ENST00000607385 239 ntBASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 AL035252.4-201ENST00000624174 288 ntBASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 AL596257.1-201ENST00000641463 2694 ntBASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 LINC01144-201ENST00000626198 1710 ntBASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC33Q8N5R6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 AC006449.6-201ENST00000612330 2296 ntBASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC33Q8N5R6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms