Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 AC112693.3-201ENST00000624819 1983 ntBASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 REXO1L6P-202ENST00000619970 1078 ntBASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRTM1Q86UE6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
LRRTM1Q86UE6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 PMS2P4-201ENST00000412466 1052 ntBASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 FAM185BP-201ENST00000443595 716 ntBASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms