Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AP006547.1-201ENST00000563435 692 ntBASIC16.25■□□□□ 0.19
DENND4AQ7Z401 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AC091271.1-201ENST00000611877 1162 ntBASIC16.25■□□□□ 0.19
DENND4AQ7Z401 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AC022211.2-201ENST00000585075 2527 ntBASIC16.25■□□□□ 0.19
DENND4AQ7Z401 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 ME2P1-201ENST00000426028 1970 ntBASIC16.25■□□□□ 0.19
DENND4AQ7Z401 REXO1L1P-202ENST00000608646 1974 ntBASIC16.25■□□□□ 0.19
DENND4AQ7Z401 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 CHMP4BP1-201ENST00000556017 588 ntBASIC16.25■□□□□ 0.19
DENND4AQ7Z401 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.25■□□□□ 0.19
DENND4AQ7Z401 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 AC006001.1-201ENST00000325130 474 ntBASIC16.24■□□□□ 0.19
DENND4AQ7Z401 FXNP2-201ENST00000411625 547 ntBASIC16.24■□□□□ 0.19
DENND4AQ7Z401 BTBD6P1-201ENST00000412176 1267 ntBASIC16.24■□□□□ 0.19
DENND4AQ7Z401 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 RN7SL190P-201ENST00000582519 257 ntBASIC16.24■□□□□ 0.19
DENND4AQ7Z401 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 AL096828.3-201ENST00000615354 462 ntBASIC16.24■□□□□ 0.19
DENND4AQ7Z401 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DENND4AQ7Z401 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC138028.6-201ENST00000616106 1482 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 FLJ38576-201ENST00000623820 2459 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC004898.1-201ENST00000451057 766 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 EEF1DP1-201ENST00000585891 896 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC015967.2-201ENST00000624092 234 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AC006435.4-201ENST00000625037 234 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AL356737.1-201ENST00000634391 234 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms