Protein–RNA interactions for Protein: P62273

RPS29, 40S ribosomal protein S29, humanhuman

Known RBP Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P62273 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC9.11□□□□□ -0.95
RPS29P62273 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
RPS29P62273 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 HIST3H2BA-201ENST00000436555 524 ntBASIC9.11□□□□□ -0.95
RPS29P62273 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC9.11□□□□□ -0.95
RPS29P62273 MDH2-205ENST00000461263 648 ntTSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 AC092183.1-201ENST00000469884 875 ntBASIC9.11□□□□□ -0.95
RPS29P62273 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC9.11□□□□□ -0.95
RPS29P62273 SLED1-202ENST00000512051 380 ntBASIC9.11□□□□□ -0.95
RPS29P62273 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC9.11□□□□□ -0.95
RPS29P62273 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC9.11□□□□□ -0.95
RPS29P62273 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC9.11□□□□□ -0.95
RPS29P62273 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC9.11□□□□□ -0.95
RPS29P62273 ORC5-208ENST00000626700 344 ntTSL 3 BASIC9.11□□□□□ -0.95
RPS29P62273 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RPS29P62273 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
RPS29P62273 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC9.11□□□□□ -0.95
RPS29P62273 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RPS29P62273 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC9.11□□□□□ -0.95
RPS29P62273 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC9.11□□□□□ -0.95
RPS29P62273 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RPS29P62273 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC9.1□□□□□ -0.95
RPS29P62273 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
RPS29P62273 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC9.1□□□□□ -0.95
RPS29P62273 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
RPS29P62273 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
RPS29P62273 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC9.1□□□□□ -0.95
RPS29P62273 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
RPS29P62273 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RPS29P62273 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms