Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB4P54760 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
EPHB4P54760 BTBD7P1-201ENST00000447253 1453 ntBASIC18.12■□□□□ 0.49
EPHB4P54760 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHB4P54760 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 AC093525.9-201ENST00000624961 1746 ntBASIC18.12■□□□□ 0.49
EPHB4P54760 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB4P54760 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.11■□□□□ 0.49
EPHB4P54760 KRT18P34-201ENST00000488218 1270 ntBASIC18.11■□□□□ 0.49
EPHB4P54760 AC093004.1-201ENST00000508850 424 ntBASIC18.11■□□□□ 0.49
EPHB4P54760 PRYP6-201ENST00000514804 343 ntBASIC18.11■□□□□ 0.49
EPHB4P54760 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHB4P54760 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
EPHB4P54760 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.11■□□□□ 0.49
EPHB4P54760 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB4P54760 MIR6775-201ENST00000617557 69 ntBASIC18.11■□□□□ 0.49
EPHB4P54760 AP001350.2-201ENST00000625104 1094 ntBASIC18.11■□□□□ 0.49
EPHB4P54760 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EPHB4P54760 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.11■□□□□ 0.49
EPHB4P54760 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EPHB4P54760 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHB4P54760 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB4P54760 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHB4P54760 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
EPHB4P54760 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHB4P54760 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
EPHB4P54760 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHB4P54760 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
EPHB4P54760 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
EPHB4P54760 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.1■□□□□ 0.49
EPHB4P54760 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.1■□□□□ 0.49
EPHB4P54760 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.1■□□□□ 0.49
EPHB4P54760 SLC7A15P-201ENST00000424028 1363 ntBASIC18.1■□□□□ 0.49
EPHB4P54760 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.1■□□□□ 0.49
EPHB4P54760 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.1■□□□□ 0.49
EPHB4P54760 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.1■□□□□ 0.49
EPHB4P54760 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.1■□□□□ 0.49
EPHB4P54760 AL512361.1-201ENST00000554200 418 ntBASIC18.1■□□□□ 0.49
EPHB4P54760 AC044860.1-202ENST00000559481 777 ntBASIC18.1■□□□□ 0.49
EPHB4P54760 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.1■□□□□ 0.49
EPHB4P54760 COX11-210ENST00000639671 696 ntBASIC18.1■□□□□ 0.49
EPHB4P54760 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.1■□□□□ 0.49
EPHB4P54760 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
EPHB4P54760 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EPHB4P54760 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.1■□□□□ 0.49
EPHB4P54760 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 AL513477.1-201ENST00000602865 2407 ntBASIC18.1■□□□□ 0.49
EPHB4P54760 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHB4P54760 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EPHB4P54760 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
EPHB4P54760 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
EPHB4P54760 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EPHB4P54760 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHB4P54760 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHB4P54760 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHB4P54760 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
EPHB4P54760 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
EPHB4P54760 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.09■□□□□ 0.49
EPHB4P54760 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHB4P54760 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHB4P54760 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.09■□□□□ 0.49
EPHB4P54760 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHB4P54760 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
EPHB4P54760 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHB4P54760 FAM220BP-201ENST00000377689 816 ntBASIC18.09■□□□□ 0.49
EPHB4P54760 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.09■□□□□ 0.49
EPHB4P54760 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms