Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD23BP54727 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD23BP54727 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD23BP54727 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD23BP54727 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAD23BP54727 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD23BP54727 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 KRT18P28-201ENST00000453838 1332 ntBASIC17.24■□□□□ 0.35
RAD23BP54727 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RAD23BP54727 AC008677.1-201ENST00000519230 1561 ntBASIC17.24■□□□□ 0.35
RAD23BP54727 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAD23BP54727 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAD23BP54727 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAD23BP54727 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD23BP54727 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD23BP54727 AC069262.1-201ENST00000539058 672 ntBASIC17.24■□□□□ 0.35
RAD23BP54727 BANF1P1-201ENST00000553684 263 ntBASIC17.24■□□□□ 0.35
RAD23BP54727 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.24■□□□□ 0.35
RAD23BP54727 MIR4453-201ENST00000584019 89 ntBASIC17.24■□□□□ 0.35
RAD23BP54727 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD23BP54727 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD23BP54727 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RAD23BP54727 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD23BP54727 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD23BP54727 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 AL603832.2-201ENST00000566195 2125 ntBASIC17.24■□□□□ 0.35
RAD23BP54727 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD23BP54727 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD23BP54727 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD23BP54727 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.23■□□□□ 0.35
RAD23BP54727 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAD23BP54727 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 AC024909.3-201ENST00000611513 2257 ntBASIC17.23■□□□□ 0.35
RAD23BP54727 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.23■□□□□ 0.35
RAD23BP54727 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.23■□□□□ 0.35
RAD23BP54727 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.23■□□□□ 0.35
RAD23BP54727 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RAD23BP54727 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RAD23BP54727 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAD23BP54727 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.23■□□□□ 0.35
RAD23BP54727 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.23■□□□□ 0.35
RAD23BP54727 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 HAUS4P1-201ENST00000406739 1145 ntBASIC17.23■□□□□ 0.35
RAD23BP54727 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.23■□□□□ 0.35
RAD23BP54727 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.23■□□□□ 0.35
RAD23BP54727 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.23■□□□□ 0.35
RAD23BP54727 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.23■□□□□ 0.35
RAD23BP54727 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.23■□□□□ 0.35
RAD23BP54727 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.23■□□□□ 0.35
RAD23BP54727 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.23■□□□□ 0.35
RAD23BP54727 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.23■□□□□ 0.35
RAD23BP54727 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.23■□□□□ 0.35
RAD23BP54727 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.23■□□□□ 0.35
RAD23BP54727 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.23■□□□□ 0.35
RAD23BP54727 MIR6080-201ENST00000617359 66 ntBASIC17.23■□□□□ 0.35
RAD23BP54727 AC093028.1-201ENST00000622998 982 ntBASIC17.23■□□□□ 0.35
RAD23BP54727 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
RAD23BP54727 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAD23BP54727 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.23■□□□□ 0.35
RAD23BP54727 AC023824.1-201ENST00000562945 2975 ntBASIC17.23■□□□□ 0.35
RAD23BP54727 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAD23BP54727 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RAD23BP54727 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAD23BP54727 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.22■□□□□ 0.35
RAD23BP54727 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAD23BP54727 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms