Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.18■□□□□ 0.82
COL15A1P39059 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.18■□□□□ 0.82
COL15A1P39059 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.18■□□□□ 0.82
COL15A1P39059 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.18■□□□□ 0.82
COL15A1P39059 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.18■□□□□ 0.82
COL15A1P39059 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
COL15A1P39059 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL15A1P39059 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.18■□□□□ 0.82
COL15A1P39059 ENPP7P5-201ENST00000541031 1031 ntBASIC20.18■□□□□ 0.82
COL15A1P39059 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL15A1P39059 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.18■□□□□ 0.82
COL15A1P39059 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
COL15A1P39059 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.17■□□□□ 0.82
COL15A1P39059 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
COL15A1P39059 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.17■□□□□ 0.82
COL15A1P39059 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.17■□□□□ 0.82
COL15A1P39059 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.17■□□□□ 0.82
COL15A1P39059 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.17■□□□□ 0.82
COL15A1P39059 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.17■□□□□ 0.82
COL15A1P39059 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.17■□□□□ 0.82
COL15A1P39059 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.17■□□□□ 0.82
COL15A1P39059 AL355864.2-201ENST00000447420 863 ntBASIC20.17■□□□□ 0.82
COL15A1P39059 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 RPL13AP25-201ENST00000484130 612 ntBASIC20.17■□□□□ 0.82
COL15A1P39059 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
COL15A1P39059 AP000812.2-201ENST00000538934 718 ntBASIC20.17■□□□□ 0.82
COL15A1P39059 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.17■□□□□ 0.82
COL15A1P39059 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.17■□□□□ 0.82
COL15A1P39059 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.17■□□□□ 0.82
COL15A1P39059 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.17■□□□□ 0.82
COL15A1P39059 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 CLUHP6-201ENST00000580789 941 ntBASIC20.17■□□□□ 0.82
COL15A1P39059 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.17■□□□□ 0.82
COL15A1P39059 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL15A1P39059 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
COL15A1P39059 MSTO2P-201ENST00000314835 1709 ntBASIC20.16■□□□□ 0.82
COL15A1P39059 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL15A1P39059 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL15A1P39059 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
COL15A1P39059 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL15A1P39059 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.16■□□□□ 0.82
COL15A1P39059 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL15A1P39059 C1QBPP1-201ENST00000400117 770 ntBASIC20.16■□□□□ 0.82
COL15A1P39059 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.16■□□□□ 0.82
COL15A1P39059 FAM21FP-201ENST00000426241 1131 ntBASIC20.16■□□□□ 0.82
COL15A1P39059 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 VDAC1P7-201ENST00000462417 847 ntBASIC20.16■□□□□ 0.82
COL15A1P39059 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.16■□□□□ 0.82
COL15A1P39059 FTH1P14-201ENST00000482930 551 ntBASIC20.16■□□□□ 0.82
COL15A1P39059 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.16■□□□□ 0.82
COL15A1P39059 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
COL15A1P39059 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.16■□□□□ 0.82
COL15A1P39059 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.16■□□□□ 0.82
COL15A1P39059 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL15A1P39059 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
COL15A1P39059 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.15■□□□□ 0.82
COL15A1P39059 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL15A1P39059 AC084018.2-201ENST00000613093 2607 ntBASIC20.15■□□□□ 0.82
COL15A1P39059 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
COL15A1P39059 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms