Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP11P24347 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MMP11P24347 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP11P24347 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP11P24347 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP11P24347 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP11P24347 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MMP11P24347 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MMP11P24347 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP11P24347 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP11P24347 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP11P24347 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MMP11P24347 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP11P24347 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.3■□□□□ 0.04
MMP11P24347 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 AC190387.1-201ENST00000551683 408 ntBASIC15.3■□□□□ 0.04
MMP11P24347 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.3■□□□□ 0.04
MMP11P24347 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.3■□□□□ 0.04
MMP11P24347 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MMP11P24347 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP11P24347 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP11P24347 AC024267.1-201ENST00000582320 895 ntBASIC15.3■□□□□ 0.04
MMP11P24347 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP11P24347 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP11P24347 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP11P24347 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MMP11P24347 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP11P24347 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
MMP11P24347 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP11P24347 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 CETN4P-206ENST00000642099 2168 ntBASIC15.29■□□□□ 0.04
MMP11P24347 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MMP11P24347 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MMP11P24347 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP11P24347 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 TSSK5P-201ENST00000423978 907 ntBASIC15.29■□□□□ 0.04
MMP11P24347 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP11P24347 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MMP11P24347 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.29■□□□□ 0.04
MMP11P24347 AC105021.1-202ENST00000570572 669 ntBASIC15.29■□□□□ 0.04
MMP11P24347 LINC02560-201ENST00000596379 459 ntBASIC15.29■□□□□ 0.04
MMP11P24347 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.29■□□□□ 0.04
MMP11P24347 RN7SL828P-201ENST00000607615 303 ntBASIC15.29■□□□□ 0.04
MMP11P24347 AC008761.3-201ENST00000624803 892 ntBASIC15.29■□□□□ 0.04
MMP11P24347 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.29■□□□□ 0.04
MMP11P24347 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 LINC00554-201ENST00000564841 3011 ntBASIC15.29■□□□□ 0.04
MMP11P24347 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MMP11P24347 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms