Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 AL133267.1-201ENST00000398220 340 ntBASIC17.61■□□□□ 0.41
Q9Y3F1 BRWD1P1-201ENST00000401091 371 ntBASIC17.61■□□□□ 0.41
Q9Y3F1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.61■□□□□ 0.41
Q9Y3F1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.61■□□□□ 0.41
Q9Y3F1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.61■□□□□ 0.41
Q9Y3F1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Q9Y3F1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.61■□□□□ 0.41
Q9Y3F1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.61■□□□□ 0.41
Q9Y3F1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.61■□□□□ 0.41
Q9Y3F1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.61■□□□□ 0.41
Q9Y3F1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 MIR6787-201ENST00000616675 61 ntBASIC17.61■□□□□ 0.41
Q9Y3F1 RHOXF1P1-202ENST00000635473 501 ntBASIC17.61■□□□□ 0.41
Q9Y3F1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Q9Y3F1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Q9Y3F1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Q9Y3F1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
Q9Y3F1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.61■□□□□ 0.41
Q9Y3F1 AL133338.1-201ENST00000565695 1517 ntBASIC17.61■□□□□ 0.41
Q9Y3F1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.61■□□□□ 0.41
Q9Y3F1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9Y3F1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9Y3F1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Q9Y3F1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.6■□□□□ 0.41
Q9Y3F1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Q9Y3F1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9Y3F1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9Y3F1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9Y3F1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Q9Y3F1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.6■□□□□ 0.41
Q9Y3F1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9Y3F1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Q9Y3F1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Q9Y3F1 YBX1P6-201ENST00000442962 1002 ntBASIC17.6■□□□□ 0.41
Q9Y3F1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.6■□□□□ 0.41
Q9Y3F1 DUX4L45-201ENST00000566406 1057 ntBASIC17.6■□□□□ 0.41
Q9Y3F1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.6■□□□□ 0.41
Q9Y3F1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.6■□□□□ 0.41
Q9Y3F1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.6■□□□□ 0.41
Q9Y3F1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Q9Y3F1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.6■□□□□ 0.41
Q9Y3F1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Q9Y3F1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Q9Y3F1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9Y3F1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9Y3F1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.59■□□□□ 0.41
Q9Y3F1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 KRT8P44-201ENST00000441609 1350 ntBASIC17.59■□□□□ 0.41
Q9Y3F1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 AC020907.1-201ENST00000616460 1350 ntBASIC17.59■□□□□ 0.41
Q9Y3F1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Q9Y3F1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Q9Y3F1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.59■□□□□ 0.41
Q9Y3F1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.59■□□□□ 0.41
Q9Y3F1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 AL606495.2-201ENST00000605867 535 ntBASIC17.59■□□□□ 0.41
Q9Y3F1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Q9Y3F1 AC008687.7-202ENST00000637404 953 ntBASIC17.59■□□□□ 0.41
Q9Y3F1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Q9Y3F1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Q9Y3F1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.59■□□□□ 0.41
Q9Y3F1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9Y3F1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.59■□□□□ 0.41
Q9Y3F1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9Y3F1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Q9Y3F1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q9Y3F1 MSTO2P-201ENST00000314835 1709 ntBASIC17.58■□□□□ 0.41
Q9Y3F1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q9Y3F1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms