Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC68Q9H2F9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC68Q9H2F9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CCDC68Q9H2F9 AC092919.2-201ENST00000623631 1645 ntBASIC16.27■□□□□ 0.19
CCDC68Q9H2F9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 MIR648-201ENST00000385046 94 ntBASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC68Q9H2F9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC68Q9H2F9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC68Q9H2F9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms