Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL13Q99616 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL13Q99616 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL13Q99616 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CCL13Q99616 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL13Q99616 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL13Q99616 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL13Q99616 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CCL13Q99616 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCL13Q99616 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
CCL13Q99616 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL13Q99616 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.52□□□□□ -0.24
CCL13Q99616 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.52□□□□□ -0.24
CCL13Q99616 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL13Q99616 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL13Q99616 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CCL13Q99616 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL13Q99616 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL13Q99616 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL13Q99616 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL13Q99616 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL13Q99616 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL13Q99616 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 AC069262.1-201ENST00000539058 672 ntBASIC13.52□□□□□ -0.25
CCL13Q99616 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL13Q99616 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL13Q99616 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL13Q99616 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL13Q99616 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CCL13Q99616 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL13Q99616 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL13Q99616 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL13Q99616 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL13Q99616 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL13Q99616 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL13Q99616 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCL13Q99616 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CCL13Q99616 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
CCL13Q99616 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
CCL13Q99616 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
CCL13Q99616 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL13Q99616 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL13Q99616 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CCL13Q99616 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL13Q99616 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL13Q99616 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 HAUS4P1-201ENST00000406739 1145 ntBASIC13.51□□□□□ -0.25
CCL13Q99616 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL13Q99616 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL13Q99616 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL13Q99616 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 AL512356.2-201ENST00000546955 174 ntBASIC13.51□□□□□ -0.25
CCL13Q99616 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL13Q99616 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL13Q99616 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms