Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.48□□□□□ -0.25
ZNF546Q86UE3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 AL390719.2-201ENST00000606993 987 ntBASIC13.48□□□□□ -0.25
ZNF546Q86UE3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.48□□□□□ -0.25
ZNF546Q86UE3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 AC004817.3-201ENST00000602957 2129 ntBASIC13.48□□□□□ -0.25
ZNF546Q86UE3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 GPAA1P2-202ENST00000606848 1787 ntBASIC13.48□□□□□ -0.25
ZNF546Q86UE3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 SLC25A3P1-201ENST00000443844 931 ntBASIC13.47□□□□□ -0.25
ZNF546Q86UE3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.47□□□□□ -0.25
ZNF546Q86UE3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF546Q86UE3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 MROH4P-201ENST00000431302 1578 ntBASIC13.46□□□□□ -0.25
ZNF546Q86UE3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF546Q86UE3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms