Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 AC079776.4-201ENST00000511039 504 ntBASIC16.53■□□□□ 0.24
CASC4Q6P4E1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 BCAR1-209ENST00000546196 1340 ntBASIC16.52■□□□□ 0.24
CASC4Q6P4E1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.52■□□□□ 0.24
CASC4Q6P4E1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 RHOQP3-201ENST00000437982 621 ntBASIC16.52■□□□□ 0.24
CASC4Q6P4E1 AC009078.2-202ENST00000463353 338 ntBASIC16.52■□□□□ 0.24
CASC4Q6P4E1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CASC4Q6P4E1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CASC4Q6P4E1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 HLA-A-201ENST00000376802 1334 ntBASIC16.51■□□□□ 0.23
CASC4Q6P4E1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AC109635.5-201ENST00000533593 962 ntBASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AC018845.2-201ENST00000568326 409 ntBASIC16.51■□□□□ 0.23
CASC4Q6P4E1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.51■□□□□ 0.23
CASC4Q6P4E1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 609.4 ms