Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 GPAA1P2-202ENST00000606848 1787 ntBASIC12.25□□□□□ -0.45
MRPL54Q6P161 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 AL390755.1-201ENST00000623716 2027 ntBASIC12.25□□□□□ -0.45
MRPL54Q6P161 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL54Q6P161 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 FAM8A6P-201ENST00000407496 1135 ntBASIC12.24□□□□□ -0.45
MRPL54Q6P161 HLA-F-220ENST00000434407 884 ntBASIC12.24□□□□□ -0.45
MRPL54Q6P161 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 AC125634.1-201ENST00000438758 1403 ntBASIC12.24□□□□□ -0.45
MRPL54Q6P161 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms