Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H3Q16695 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST3H3Q16695 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H3Q16695 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST3H3Q16695 CYP4F24P-201ENST00000586049 1580 ntBASIC14.22□□□□□ -0.13
HIST3H3Q16695 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 RBPMS2P1-201ENST00000437762 623 ntBASIC14.21□□□□□ -0.13
HIST3H3Q16695 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 AC023141.5-201ENST00000458585 616 ntBASIC14.21□□□□□ -0.13
HIST3H3Q16695 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 AC134684.3-201ENST00000641758 218 ntBASIC14.21□□□□□ -0.13
HIST3H3Q16695 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST3H3Q16695 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST3H3Q16695 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST3H3Q16695 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST3H3Q16695 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HIST3H3Q16695 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.14
HIST3H3Q16695 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HIST3H3Q16695 AC008741.2-201ENST00000612792 3115 ntBASIC14.21□□□□□ -0.14
HIST3H3Q16695 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST3H3Q16695 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HIST3H3Q16695 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.21□□□□□ -0.14
HIST3H3Q16695 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 KRT18P13-201ENST00000400056 1290 ntBASIC14.2□□□□□ -0.14
HIST3H3Q16695 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 BANF1P1-201ENST00000553684 263 ntBASIC14.2□□□□□ -0.14
HIST3H3Q16695 AC026150.2-201ENST00000564693 1156 ntBASIC14.2□□□□□ -0.14
HIST3H3Q16695 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 REXO1L1P-202ENST00000608646 1974 ntBASIC14.2□□□□□ -0.14
HIST3H3Q16695 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST3H3Q16695 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST3H3Q16695 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST3H3Q16695 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HIST3H3Q16695 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms