Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 AC067750.1-201ENST00000608826 6545 ntBASIC16.9■□□□□ 0.3
CBX1P83916 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.9■□□□□ 0.3
CBX1P83916 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CBX1P83916 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 POU5F1P6-201ENST00000466990 990 ntBASIC16.9■□□□□ 0.3
CBX1P83916 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.9■□□□□ 0.3
CBX1P83916 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.9■□□□□ 0.3
CBX1P83916 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CBX1P83916 AL023775.1-201ENST00000454907 1746 ntBASIC16.9■□□□□ 0.3
CBX1P83916 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CBX1P83916 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CBX1P83916 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.89■□□□□ 0.29
CBX1P83916 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.89■□□□□ 0.29
CBX1P83916 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
CBX1P83916 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CBX1P83916 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.89■□□□□ 0.29
CBX1P83916 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.89■□□□□ 0.29
CBX1P83916 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.89■□□□□ 0.29
CBX1P83916 KRASP1-201ENST00000407852 552 ntBASIC16.89■□□□□ 0.29
CBX1P83916 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.89■□□□□ 0.29
CBX1P83916 UNC93B5-201ENST00000530315 699 ntBASIC16.89■□□□□ 0.29
CBX1P83916 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.89■□□□□ 0.29
CBX1P83916 AC019129.2-201ENST00000609837 1235 ntBASIC16.89■□□□□ 0.29
CBX1P83916 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.89■□□□□ 0.29
CBX1P83916 AL512652.2-201ENST00000625156 1716 ntBASIC16.89■□□□□ 0.29
CBX1P83916 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.89■□□□□ 0.29
CBX1P83916 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.89■□□□□ 0.29
CBX1P83916 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CBX1P83916 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CBX1P83916 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.89■□□□□ 0.29
CBX1P83916 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CBX1P83916 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CBX1P83916 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX1P83916 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.89■□□□□ 0.29
CBX1P83916 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.89■□□□□ 0.29
CBX1P83916 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.88■□□□□ 0.29
CBX1P83916 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.88■□□□□ 0.29
CBX1P83916 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.88■□□□□ 0.29
CBX1P83916 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 AL359881.3-201ENST00000602640 1721 ntBASIC16.88■□□□□ 0.29
CBX1P83916 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.88■□□□□ 0.29
CBX1P83916 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.88■□□□□ 0.29
CBX1P83916 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CBX1P83916 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CBX1P83916 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.88■□□□□ 0.29
CBX1P83916 AC011506.1-201ENST00000474329 610 ntBASIC16.88■□□□□ 0.29
CBX1P83916 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.88■□□□□ 0.29
CBX1P83916 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CBX1P83916 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.88■□□□□ 0.29
CBX1P83916 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.88■□□□□ 0.29
CBX1P83916 AC008403.3-201ENST00000598924 454 ntBASIC16.88■□□□□ 0.29
CBX1P83916 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.88■□□□□ 0.29
CBX1P83916 AL023875.1-201ENST00000640777 796 ntBASIC16.88■□□□□ 0.29
CBX1P83916 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms