Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 AC131212.3-201ENST00000624087 4219 ntBASIC14.19□□□□□ -0.14
DEFA3P59666 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 GUSBP6-202ENST00000438529 1198 ntBASIC14.19□□□□□ -0.14
DEFA3P59666 TSPY6P-201ENST00000448518 926 ntBASIC14.19□□□□□ -0.14
DEFA3P59666 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 AP003097.1-201ENST00000530657 1135 ntBASIC14.19□□□□□ -0.14
DEFA3P59666 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 AC087623.3-201ENST00000607047 1098 ntBASIC14.19□□□□□ -0.14
DEFA3P59666 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 AL157888.1-201ENST00000631930 593 ntBASIC14.19□□□□□ -0.14
DEFA3P59666 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA3P59666 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
DEFA3P59666 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.18□□□□□ -0.14
DEFA3P59666 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
DEFA3P59666 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
DEFA3P59666 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
DEFA3P59666 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA3P59666 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 AC105250.1-201ENST00000509378 2057 ntBASIC14.18□□□□□ -0.14
DEFA3P59666 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
DEFA3P59666 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
DEFA3P59666 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA3P59666 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.18□□□□□ -0.14
DEFA3P59666 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 CDCA4P2-201ENST00000441182 718 ntBASIC14.18□□□□□ -0.14
DEFA3P59666 AC122714.2-201ENST00000502787 707 ntBASIC14.18□□□□□ -0.14
DEFA3P59666 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.18□□□□□ -0.14
DEFA3P59666 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.18□□□□□ -0.14
DEFA3P59666 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.18□□□□□ -0.14
DEFA3P59666 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA3P59666 LINC01230-201ENST00000625222 3017 ntBASIC14.18□□□□□ -0.14
DEFA3P59666 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 AL122018.1-201ENST00000446607 2310 ntBASIC14.18□□□□□ -0.14
DEFA3P59666 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
DEFA3P59666 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA3P59666 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA3P59666 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
DEFA3P59666 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA3P59666 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.17□□□□□ -0.14
DEFA3P59666 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA3P59666 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms