Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.04□□□□□ -0.32
ACANP16112 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.04□□□□□ -0.32
ACANP16112 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.04□□□□□ -0.32
ACANP16112 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ACANP16112 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ACANP16112 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 AC234644.1-201ENST00000406065 370 ntBASIC13.03□□□□□ -0.32
ACANP16112 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.03□□□□□ -0.32
ACANP16112 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.03□□□□□ -0.32
ACANP16112 AC135983.4-201ENST00000564116 1262 ntBASIC13.03□□□□□ -0.32
ACANP16112 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.03□□□□□ -0.32
ACANP16112 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 AC006480.2-201ENST00000609770 1337 ntBASIC13.03□□□□□ -0.32
ACANP16112 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.03□□□□□ -0.32
ACANP16112 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.03□□□□□ -0.32
ACANP16112 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.03□□□□□ -0.32
ACANP16112 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ACANP16112 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.03□□□□□ -0.32
ACANP16112 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.03□□□□□ -0.32
ACANP16112 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.03□□□□□ -0.32
ACANP16112 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.03□□□□□ -0.32
ACANP16112 AL645939.5-201ENST00000606834 243 ntBASIC13.03□□□□□ -0.32
ACANP16112 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.03□□□□□ -0.32
ACANP16112 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACANP16112 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.03□□□□□ -0.32
ACANP16112 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.02□□□□□ -0.32
ACANP16112 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
ACANP16112 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
ACANP16112 IMP3P2-201ENST00000489760 475 ntBASIC13.02□□□□□ -0.32
ACANP16112 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.02□□□□□ -0.32
ACANP16112 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.02□□□□□ -0.32
ACANP16112 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.02□□□□□ -0.32
ACANP16112 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 AC138649.2-201ENST00000615886 705 ntBASIC13.02□□□□□ -0.32
ACANP16112 CU633904.3-201ENST00000624042 1029 ntBASIC13.02□□□□□ -0.32
ACANP16112 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.02□□□□□ -0.32
ACANP16112 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.02□□□□□ -0.32
ACANP16112 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACANP16112 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.02□□□□□ -0.33
ACANP16112 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ACANP16112 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ACANP16112 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ACANP16112 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ACANP16112 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACANP16112 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACANP16112 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.02□□□□□ -0.33
ACANP16112 AC134043.2-201ENST00000624206 2238 ntBASIC13.02□□□□□ -0.33
ACANP16112 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACANP16112 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACANP16112 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.02□□□□□ -0.33
ACANP16112 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.02□□□□□ -0.33
ACANP16112 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms