Protein–RNA interactions for Protein: P01597

IGKV1-39, Immunoglobulin kappa variable 1-39, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39P01597 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-39P01597 AC148477.8-201ENST00000624298 468 ntBASIC13.11□□□□□ -0.31
IGKV1-39P01597 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-39P01597 AC073439.1-201ENST00000624121 1774 ntBASIC13.11□□□□□ -0.31
IGKV1-39P01597 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-39P01597 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-39P01597 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-39P01597 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-39P01597 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-39P01597 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 AP001282.1-201ENST00000531301 1499 ntBASIC13.1□□□□□ -0.31
IGKV1-39P01597 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.1□□□□□ -0.31
IGKV1-39P01597 GPX1P2-201ENST00000429271 606 ntBASIC13.1□□□□□ -0.31
IGKV1-39P01597 KRT18P34-201ENST00000488218 1270 ntBASIC13.1□□□□□ -0.31
IGKV1-39P01597 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 AL009183.1-201ENST00000603760 355 ntBASIC13.1□□□□□ -0.31
IGKV1-39P01597 AL078644.1-201ENST00000609881 752 ntBASIC13.1□□□□□ -0.31
IGKV1-39P01597 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.1□□□□□ -0.31
IGKV1-39P01597 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 C18orf15-201ENST00000623680 2534 ntBASIC13.1□□□□□ -0.31
IGKV1-39P01597 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV1-39P01597 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
IGKV1-39P01597 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV1-39P01597 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 AC108751.1-201ENST00000490852 363 ntBASIC13.09□□□□□ -0.31
IGKV1-39P01597 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 AC002347.1-201ENST00000569543 541 ntBASIC13.09□□□□□ -0.31
IGKV1-39P01597 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.09□□□□□ -0.31
IGKV1-39P01597 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms