Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMCC1O94876 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMCC1O94876 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TMCC1O94876 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMCC1O94876 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMCC1O94876 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.64■□□□□ 0.25
TMCC1O94876 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMCC1O94876 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMCC1O94876 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TMCC1O94876 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMCC1O94876 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.64■□□□□ 0.25
TMCC1O94876 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.64■□□□□ 0.25
TMCC1O94876 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC1O94876 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMCC1O94876 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMCC1O94876 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC1O94876 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC1O94876 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC1O94876 AC022188.1-201ENST00000620960 1664 ntBASIC16.63■□□□□ 0.25
TMCC1O94876 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.63■□□□□ 0.25
TMCC1O94876 HLA-H-201ENST00000383620 1096 ntBASIC16.63■□□□□ 0.25
TMCC1O94876 PMS2P2-201ENST00000425039 1128 ntBASIC16.63■□□□□ 0.25
TMCC1O94876 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.63■□□□□ 0.25
TMCC1O94876 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC1O94876 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.63■□□□□ 0.25
TMCC1O94876 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.63■□□□□ 0.25
TMCC1O94876 AP001059.3-201ENST00000619053 235 ntBASIC16.63■□□□□ 0.25
TMCC1O94876 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TMCC1O94876 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC1O94876 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TMCC1O94876 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.63■□□□□ 0.25
TMCC1O94876 AP3S2-216ENST00000617003 1561 ntBASIC16.63■□□□□ 0.25
TMCC1O94876 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMCC1O94876 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.63■□□□□ 0.25
TMCC1O94876 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TMCC1O94876 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC1O94876 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMCC1O94876 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.62■□□□□ 0.25
TMCC1O94876 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TMCC1O94876 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.62■□□□□ 0.25
TMCC1O94876 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 RARRES2P9-201ENST00000565168 469 ntBASIC16.62■□□□□ 0.25
TMCC1O94876 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 LINC02228-204ENST00000642115 2962 ntBASIC16.62■□□□□ 0.25
TMCC1O94876 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.62■□□□□ 0.25
TMCC1O94876 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.62■□□□□ 0.25
TMCC1O94876 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TMCC1O94876 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TMCC1O94876 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.62■□□□□ 0.25
TMCC1O94876 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
TMCC1O94876 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC1O94876 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms