Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
A0A1W2PRF3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
A0A1W2PRF3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
A0A1W2PRF3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.34□□□□□ -0.27
A0A1W2PRF3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.34□□□□□ -0.27
A0A1W2PRF3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
A0A1W2PRF3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
A0A1W2PRF3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
A0A1W2PRF3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
A0A1W2PRF3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
A0A1W2PRF3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
A0A1W2PRF3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
A0A1W2PRF3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
A0A1W2PRF3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
A0A1W2PRF3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 MIR943-201ENST00000401286 94 ntBASIC13.33□□□□□ -0.28
A0A1W2PRF3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 TREML5P-201ENST00000421694 576 ntBASIC13.33□□□□□ -0.28
A0A1W2PRF3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 MTND6P24-201ENST00000440466 518 ntBASIC13.33□□□□□ -0.28
A0A1W2PRF3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.33□□□□□ -0.28
A0A1W2PRF3 KLF2P3-201ENST00000451977 1087 ntBASIC13.33□□□□□ -0.28
A0A1W2PRF3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 AC073389.1-201ENST00000595595 795 ntBASIC13.33□□□□□ -0.28
A0A1W2PRF3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
A0A1W2PRF3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
A0A1W2PRF3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 MIR770-201ENST00000390219 98 ntBASIC13.32□□□□□ -0.28
A0A1W2PRF3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 SPDYE7P-202ENST00000420373 878 ntBASIC13.32□□□□□ -0.28
A0A1W2PRF3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 AC093724.1-201ENST00000448659 1027 ntBASIC13.32□□□□□ -0.28
A0A1W2PRF3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 AC093214.1-201ENST00000511688 1107 ntBASIC13.32□□□□□ -0.28
A0A1W2PRF3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms