Protein–RNA interactions for Protein: Q9UGQ2

CACFD1, Calcium channel flower homolog, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1Q9UGQ2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 AC010654.1-201ENST00000615722 808 ntBASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 AC116407.4-201ENST00000623319 1061 ntBASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 AL671710.1-201ENST00000610245 2349 ntBASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACFD1Q9UGQ2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 AC106795.1-205ENST00000512851 1056 ntBASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 AL109954.1-202ENST00000564051 2148 ntBASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 PGM5P2-202ENST00000637225 1043 ntBASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 AC129492.6-201ENST00000611383 1305 ntBASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.35□□□□□ -0.27
CACFD1Q9UGQ2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 FAM86EP-206ENST00000510506 987 ntBASIC13.34□□□□□ -0.27
CACFD1Q9UGQ2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms