Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 RN7SL692P-201ENST00000464677 288 ntBASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 NME2P1-201ENST00000426182 414 ntBASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HDAC6Q9UBN7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AC024909.3-201ENST00000611513 2257 ntBASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 CR383656.12-201ENST00000549567 513 ntBASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AL079307.3-201ENST00000556114 283 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms