Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 AC008667.4-201ENST00000607370 168 ntBASIC18.07■□□□□ 0.48
CBX8Q9HC52 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 HMGA1P7-201ENST00000406908 502 ntBASIC18.06■□□□□ 0.48
CBX8Q9HC52 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 OR7E47P-204ENST00000575924 449 ntBASIC18.06■□□□□ 0.48
CBX8Q9HC52 MIR4515-201ENST00000584082 81 ntBASIC18.06■□□□□ 0.48
CBX8Q9HC52 AL031055.1-201ENST00000606362 631 ntBASIC18.06■□□□□ 0.48
CBX8Q9HC52 ACTL9-202ENST00000612068 1252 ntBASIC18.06■□□□□ 0.48
CBX8Q9HC52 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CBX8Q9HC52 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX8Q9HC52 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CBX8Q9HC52 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 LINC01101-201ENST00000622953 1884 ntBASIC18.05■□□□□ 0.48
CBX8Q9HC52 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CBX8Q9HC52 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CBX8Q9HC52 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CBX8Q9HC52 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CBX8Q9HC52 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 IGHV3-65-201ENST00000523210 341 ntBASIC18.05■□□□□ 0.48
CBX8Q9HC52 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 AL358472.4-201ENST00000633140 710 ntBASIC18.05■□□□□ 0.48
CBX8Q9HC52 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CBX8Q9HC52 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CBX8Q9HC52 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CBX8Q9HC52 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.05■□□□□ 0.48
CBX8Q9HC52 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.04■□□□□ 0.48
CBX8Q9HC52 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.04■□□□□ 0.48
CBX8Q9HC52 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CBX8Q9HC52 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CBX8Q9HC52 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms