Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.79■□□□□ 0.6
EFCC1Q9HA90 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
EFCC1Q9HA90 TCAF2P1-201ENST00000291129 2421 ntBASIC18.79■□□□□ 0.6
EFCC1Q9HA90 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AC092506.1-202ENST00000401022 528 ntBASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AL589987.1-201ENST00000453380 819 ntBASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFCC1Q9HA90 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 C8orf49-201ENST00000525043 1968 ntBASIC18.77■□□□□ 0.6
EFCC1Q9HA90 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFCC1Q9HA90 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms