Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 AC067863.1-201ENST00000494933 530 ntBASIC16.72■□□□□ 0.27
HAPLN3Q96S86 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.72■□□□□ 0.27
HAPLN3Q96S86 BANF1P1-201ENST00000553684 263 ntBASIC16.72■□□□□ 0.27
HAPLN3Q96S86 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 AP001282.1-201ENST00000531301 1499 ntBASIC16.72■□□□□ 0.27
HAPLN3Q96S86 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.72■□□□□ 0.27
HAPLN3Q96S86 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 TUBB3P1-201ENST00000405796 1332 ntBASIC16.71■□□□□ 0.27
HAPLN3Q96S86 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 AC243562.2-201ENST00000561247 970 ntBASIC16.71■□□□□ 0.27
HAPLN3Q96S86 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HAPLN3Q96S86 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
HAPLN3Q96S86 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 AC004987.2-201ENST00000395959 1148 ntBASIC16.7■□□□□ 0.26
HAPLN3Q96S86 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 AL645939.2-201ENST00000427340 991 ntBASIC16.7■□□□□ 0.26
HAPLN3Q96S86 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 AC051619.7-201ENST00000568314 623 ntBASIC16.7■□□□□ 0.26
HAPLN3Q96S86 RN7SL828P-201ENST00000607615 303 ntBASIC16.7■□□□□ 0.26
HAPLN3Q96S86 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 LINC02228-204ENST00000642115 2962 ntBASIC16.7■□□□□ 0.26
HAPLN3Q96S86 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HAPLN3Q96S86 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms