Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 SPDYE14P-201ENST00000442619 822 ntBASIC18.77■□□□□ 0.6
PGBD1Q96JS3 AC093724.1-201ENST00000448659 1027 ntBASIC18.77■□□□□ 0.6
PGBD1Q96JS3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 AC105233.2-201ENST00000523697 349 ntBASIC18.77■□□□□ 0.6
PGBD1Q96JS3 AF228730.5-201ENST00000530288 346 ntBASIC18.77■□□□□ 0.6
PGBD1Q96JS3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 AC004449.1-201ENST00000564240 433 ntBASIC18.77■□□□□ 0.6
PGBD1Q96JS3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 AC073389.1-201ENST00000595595 795 ntBASIC18.77■□□□□ 0.6
PGBD1Q96JS3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 AC073347.1-201ENST00000421633 2643 ntBASIC18.77■□□□□ 0.6
PGBD1Q96JS3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PGBD1Q96JS3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PGBD1Q96JS3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PGBD1Q96JS3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
PGBD1Q96JS3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
PGBD1Q96JS3 DBET-201ENST00000630918 3363 ntBASIC18.76■□□□□ 0.59
PGBD1Q96JS3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 HLA-J-203ENST00000494367 1087 ntBASIC18.76■□□□□ 0.59
PGBD1Q96JS3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 AC084121.4-201ENST00000641598 221 ntBASIC18.76■□□□□ 0.59
PGBD1Q96JS3 AF228730.8-201ENST00000642140 221 ntBASIC18.76■□□□□ 0.59
PGBD1Q96JS3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.76■□□□□ 0.59
PGBD1Q96JS3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 AC026150.2-201ENST00000564693 1156 ntBASIC18.75■□□□□ 0.59
PGBD1Q96JS3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 AC106028.4-201ENST00000614509 607 ntBASIC18.75■□□□□ 0.59
PGBD1Q96JS3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PGBD1Q96JS3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 MIR648-201ENST00000385046 94 ntBASIC18.74■□□□□ 0.59
PGBD1Q96JS3 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.74■□□□□ 0.59
PGBD1Q96JS3 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms