Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 PMS2P1-201ENST00000431037 1228 ntBASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 PAWRP1-201ENST00000451083 565 ntBASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L1Q8WWY6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L1Q8WWY6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 SLC22A20-204ENST00000530038 1673 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AC005840.4-201ENST00000541242 2494 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 LINC01568-207ENST00000641790 1380 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 ARMC10P1-201ENST00000313754 855 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 MIR718-201ENST00000390190 70 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 SLC25A3P1-201ENST00000443844 931 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 IGHV3-41-201ENST00000613121 348 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AP001350.2-201ENST00000625104 1094 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 AC007686.3-201ENST00000619017 3487 ntBASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L1Q8WWY6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms