Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 HLA-A-201ENST00000376802 1334 ntBASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 AC108751.1-201ENST00000490852 363 ntBASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 AC010654.1-201ENST00000615722 808 ntBASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 AC004790.2-201ENST00000623588 572 ntBASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTN4IP1Q8WWV3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 TNRC18P2-201ENST00000417666 2714 ntBASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 PCDHA3-202ENST00000532566 4594 ntBASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 MIR4751-201ENST00000578027 74 ntBASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 AC005412.3-201ENST00000580309 715 ntBASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 AL121894.2-201ENST00000602977 491 ntBASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms