Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC008735.3-201ENST00000596646 500 ntBASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 PCDHA14-201ENST00000506751 2298 ntBASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 AC119751.2-201ENST00000504529 210 ntBASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 MIR4259-201ENST00000584466 101 ntBASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 MIR4321-201ENST00000592276 80 ntBASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 BTNL10-201ENST00000595971 695 ntBASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 AL033527.4-201ENST00000641026 673 ntBASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 CLK3P2-201ENST00000427566 1453 ntBASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.35■□□□□ 0.21
SYNPOQ8N3V7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 TMEM14DP-201ENST00000422205 345 ntBASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 AC104989.1-201ENST00000519711 778 ntBASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms