Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM71Q2Q1W2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 REXO1L8P-201ENST00000604378 1897 ntBASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 AC099336.1-201ENST00000417053 1171 ntBASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 MIR4525-201ENST00000580000 75 ntBASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM71Q2Q1W2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM71Q2Q1W2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.46■□□□□ 0.38
TRIM71Q2Q1W2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 MIR1908-201ENST00000410394 80 ntBASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 ACTBP11-201ENST00000436287 1126 ntBASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 KLF2P4-201ENST00000451959 1225 ntBASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AP001889.1-201ENST00000525414 633 ntBASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM71Q2Q1W2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms