Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PMS2P2-201ENST00000425039 1128 ntBASIC12.03□□□□□ -0.48
CMC4P56277 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.03□□□□□ -0.48
CMC4P56277 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 AC125807.1-201ENST00000483097 614 ntBASIC12.03□□□□□ -0.48
CMC4P56277 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 AC109322.1-201ENST00000524499 1264 ntBASIC12.03□□□□□ -0.48
CMC4P56277 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.03□□□□□ -0.48
CMC4P56277 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.03□□□□□ -0.48
CMC4P56277 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CMC4P56277 Z92544.3-201ENST00000624747 417 ntBASIC12.03□□□□□ -0.48
CMC4P56277 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CMC4P56277 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 PCDHA14-201ENST00000506751 2298 ntBASIC12.03□□□□□ -0.48
CMC4P56277 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.03□□□□□ -0.48
CMC4P56277 AL691432.1-201ENST00000596308 1422 ntBASIC12.03□□□□□ -0.48
CMC4P56277 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.02□□□□□ -0.48
CMC4P56277 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
CMC4P56277 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CMC4P56277 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.02□□□□□ -0.48
CMC4P56277 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CMC4P56277 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.02□□□□□ -0.49
CMC4P56277 MTND6P24-201ENST00000440466 518 ntBASIC12.02□□□□□ -0.49
CMC4P56277 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.02□□□□□ -0.49
CMC4P56277 HLA-V-204ENST00000476601 1289 ntBASIC12.02□□□□□ -0.49
CMC4P56277 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.02□□□□□ -0.49
CMC4P56277 RNA5SP421-201ENST00000516864 134 ntBASIC12.02□□□□□ -0.49
CMC4P56277 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.02□□□□□ -0.49
CMC4P56277 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.02□□□□□ -0.49
CMC4P56277 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.02□□□□□ -0.49
CMC4P56277 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.02□□□□□ -0.49
CMC4P56277 AL158211.3-201ENST00000607385 239 ntBASIC12.02□□□□□ -0.49
CMC4P56277 AL589739.1-201ENST00000607720 493 ntBASIC12.02□□□□□ -0.49
CMC4P56277 MIR6069-201ENST00000620069 79 ntBASIC12.02□□□□□ -0.49
CMC4P56277 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CMC4P56277 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.02□□□□□ -0.49
CMC4P56277 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.02□□□□□ -0.49
CMC4P56277 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CMC4P56277 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.02□□□□□ -0.49
CMC4P56277 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CMC4P56277 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CMC4P56277 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CMC4P56277 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.01□□□□□ -0.49
CMC4P56277 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.01□□□□□ -0.49
CMC4P56277 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CMC4P56277 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms