Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA2D1P54289 RPL37AP1-201ENST00000412502 279 ntBASIC17.14■□□□□ 0.33
CACNA2D1P54289 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA2D1P54289 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.14■□□□□ 0.33
CACNA2D1P54289 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 AC027369.6-201ENST00000525520 931 ntBASIC17.14■□□□□ 0.33
CACNA2D1P54289 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.14■□□□□ 0.33
CACNA2D1P54289 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA2D1P54289 AL096865.1-201ENST00000606796 927 ntBASIC17.14■□□□□ 0.33
CACNA2D1P54289 AC073592.8-201ENST00000624126 511 ntBASIC17.14■□□□□ 0.33
CACNA2D1P54289 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CACNA2D1P54289 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA2D1P54289 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.14■□□□□ 0.33
CACNA2D1P54289 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA2D1P54289 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 TSSK5P-201ENST00000423978 907 ntBASIC17.13■□□□□ 0.33
CACNA2D1P54289 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 AC024267.1-201ENST00000582320 895 ntBASIC17.13■□□□□ 0.33
CACNA2D1P54289 AC011467.4-201ENST00000594891 528 ntBASIC17.13■□□□□ 0.33
CACNA2D1P54289 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CACNA2D1P54289 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 AC100757.3-201ENST00000622361 1406 ntBASIC17.13■□□□□ 0.33
CACNA2D1P54289 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA2D1P54289 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 MIR661-201ENST00000384842 89 ntBASIC17.12■□□□□ 0.33
CACNA2D1P54289 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 MIR4321-201ENST00000592276 80 ntBASIC17.12■□□□□ 0.33
CACNA2D1P54289 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 AL590560.3-201ENST00000623350 461 ntBASIC17.12■□□□□ 0.33
CACNA2D1P54289 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 AL035456.1-201ENST00000456064 1369 ntBASIC17.12■□□□□ 0.33
CACNA2D1P54289 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA2D1P54289 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA2D1P54289 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms