Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 GGT4P-201ENST00000623672 1708 ntBASIC15.21■□□□□ 0.03
SMSP52788 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 AC006449.6-201ENST00000612330 2296 ntBASIC15.21■□□□□ 0.03
SMSP52788 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SMSP52788 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.21■□□□□ 0.03
SMSP52788 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.21■□□□□ 0.03
SMSP52788 AL671277.1-201ENST00000429656 993 ntBASIC15.21■□□□□ 0.03
SMSP52788 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 CNN2P2-201ENST00000443536 909 ntBASIC15.21■□□□□ 0.03
SMSP52788 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.21■□□□□ 0.03
SMSP52788 CNN2P3-201ENST00000450201 906 ntBASIC15.21■□□□□ 0.03
SMSP52788 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.21■□□□□ 0.03
SMSP52788 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.21■□□□□ 0.03
SMSP52788 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.21■□□□□ 0.03
SMSP52788 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 AL136317.3-201ENST00000618497 906 ntBASIC15.21■□□□□ 0.03
SMSP52788 NORAD-201ENST00000565493 5339 ntBASIC15.21■□□□□ 0.03
SMSP52788 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.21■□□□□ 0.03
SMSP52788 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMSP52788 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SMSP52788 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMSP52788 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.21■□□□□ 0.02
SMSP52788 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SMSP52788 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 AL603832.2-201ENST00000566195 2125 ntBASIC15.2■□□□□ 0.02
SMSP52788 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.2■□□□□ 0.02
SMSP52788 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.2■□□□□ 0.02
SMSP52788 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.2■□□□□ 0.02
SMSP52788 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SMSP52788 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 AL627223.1-201ENST00000416693 442 ntBASIC15.2■□□□□ 0.02
SMSP52788 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.2■□□□□ 0.02
SMSP52788 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.2■□□□□ 0.02
SMSP52788 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.2■□□□□ 0.02
SMSP52788 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 AC069262.1-201ENST00000539058 672 ntBASIC15.2■□□□□ 0.02
SMSP52788 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.2■□□□□ 0.02
SMSP52788 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.2■□□□□ 0.02
SMSP52788 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
SMSP52788 AC015911.4-201ENST00000588022 1070 ntBASIC15.2■□□□□ 0.02
SMSP52788 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.2■□□□□ 0.02
SMSP52788 AC009093.7-201ENST00000623853 1223 ntBASIC15.2■□□□□ 0.02
SMSP52788 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.2■□□□□ 0.02
SMSP52788 AL645728.2-201ENST00000641974 660 ntBASIC15.2■□□□□ 0.02
SMSP52788 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SMSP52788 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.2■□□□□ 0.02
SMSP52788 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 TOP3BP1-201ENST00000420768 1380 ntBASIC15.2■□□□□ 0.02
SMSP52788 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SMSP52788 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.2■□□□□ 0.02
SMSP52788 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.2■□□□□ 0.02
SMSP52788 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMSP52788 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms