Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 KLF2P3-201ENST00000451977 1087 ntBASIC16.05■□□□□ 0.16
HMGCLP35914 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.05■□□□□ 0.16
HMGCLP35914 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGCLP35914 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGCLP35914 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.05■□□□□ 0.16
HMGCLP35914 LINC02199-201ENST00000506655 2702 ntBASIC16.05■□□□□ 0.16
HMGCLP35914 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGCLP35914 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.05■□□□□ 0.16
HMGCLP35914 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HMGCLP35914 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HMGCLP35914 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
HMGCLP35914 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGCLP35914 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HMGCLP35914 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGCLP35914 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HMGCLP35914 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.04■□□□□ 0.16
HMGCLP35914 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 FAM86GP-201ENST00000448322 971 ntBASIC16.04■□□□□ 0.16
HMGCLP35914 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.04■□□□□ 0.16
HMGCLP35914 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.04■□□□□ 0.16
HMGCLP35914 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.04■□□□□ 0.16
HMGCLP35914 AC140878.1-201ENST00000565277 250 ntBASIC16.04■□□□□ 0.16
HMGCLP35914 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.04■□□□□ 0.16
HMGCLP35914 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.04■□□□□ 0.16
HMGCLP35914 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 AL162727.3-201ENST00000635661 2787 ntBASIC16.04■□□□□ 0.16
HMGCLP35914 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGCLP35914 AC022188.1-201ENST00000620960 1664 ntBASIC16.04■□□□□ 0.16
HMGCLP35914 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCLP35914 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGCLP35914 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCLP35914 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 KRT8P37-201ENST00000451609 1420 ntBASIC16.03■□□□□ 0.16
HMGCLP35914 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCLP35914 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 AL645939.2-201ENST00000427340 991 ntBASIC16.03■□□□□ 0.16
HMGCLP35914 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 MTND6P24-201ENST00000440466 518 ntBASIC16.03■□□□□ 0.16
HMGCLP35914 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 AC125807.1-201ENST00000483097 614 ntBASIC16.03■□□□□ 0.16
HMGCLP35914 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms