Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 AC024909.3-201ENST00000611513 2257 ntBASIC15.35■□□□□ 0.05
MMP11P24347 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
MMP11P24347 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 TSPY16P-201ENST00000449843 468 ntBASIC15.35■□□□□ 0.05
MMP11P24347 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.35■□□□□ 0.05
MMP11P24347 AC027369.6-201ENST00000525520 931 ntBASIC15.35■□□□□ 0.05
MMP11P24347 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
MMP11P24347 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP11P24347 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.35■□□□□ 0.05
MMP11P24347 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 GGT3P-204ENST00000453783 1664 ntBASIC15.35■□□□□ 0.05
MMP11P24347 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP11P24347 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP11P24347 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP11P24347 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.34■□□□□ 0.05
MMP11P24347 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.34■□□□□ 0.05
MMP11P24347 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.34■□□□□ 0.05
MMP11P24347 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 FAM207CP-201ENST00000443486 507 ntBASIC15.34■□□□□ 0.05
MMP11P24347 COX20P2-201ENST00000452636 358 ntBASIC15.34■□□□□ 0.05
MMP11P24347 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MMP11P24347 HLA-V-204ENST00000476601 1289 ntBASIC15.34■□□□□ 0.05
MMP11P24347 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 RNA5SP410-201ENST00000516285 106 ntBASIC15.34■□□□□ 0.05
MMP11P24347 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.34■□□□□ 0.05
MMP11P24347 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.34■□□□□ 0.05
MMP11P24347 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.34■□□□□ 0.05
MMP11P24347 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP11P24347 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 GPAA1P2-202ENST00000606848 1787 ntBASIC15.34■□□□□ 0.05
MMP11P24347 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP11P24347 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.33■□□□□ 0.05
MMP11P24347 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.33■□□□□ 0.05
MMP11P24347 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MMP11P24347 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MMP11P24347 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP11P24347 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
MMP11P24347 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP11P24347 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MMP11P24347 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP11P24347 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MMP11P24347 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MMP11P24347 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MMP11P24347 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.33■□□□□ 0.04
MMP11P24347 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.33■□□□□ 0.04
MMP11P24347 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms