Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 PCDHA14-201ENST00000506751 2298 ntBASIC13.87□□□□□ -0.19
TNFSF4P23510 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TNFSF4P23510 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 AC092183.1-201ENST00000469884 875 ntBASIC13.87□□□□□ -0.19
TNFSF4P23510 HLA-J-203ENST00000494367 1087 ntBASIC13.87□□□□□ -0.19
TNFSF4P23510 AC067863.1-201ENST00000494933 530 ntBASIC13.87□□□□□ -0.19
TNFSF4P23510 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.87□□□□□ -0.19
TNFSF4P23510 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.87□□□□□ -0.19
TNFSF4P23510 AC093520.2-201ENST00000561830 333 ntBASIC13.87□□□□□ -0.19
TNFSF4P23510 RARRES2P9-201ENST00000565168 469 ntBASIC13.87□□□□□ -0.19
TNFSF4P23510 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.87□□□□□ -0.19
TNFSF4P23510 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.87□□□□□ -0.19
TNFSF4P23510 AC026979.3-201ENST00000607315 403 ntBASIC13.87□□□□□ -0.19
TNFSF4P23510 MIR6080-201ENST00000617359 66 ntBASIC13.87□□□□□ -0.19
TNFSF4P23510 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TNFSF4P23510 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 FAM58DP-201ENST00000428076 619 ntBASIC13.86□□□□□ -0.19
TNFSF4P23510 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 FAM86GP-201ENST00000448322 971 ntBASIC13.86□□□□□ -0.19
TNFSF4P23510 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TNFSF4P23510 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TNFSF4P23510 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.86□□□□□ -0.19
TNFSF4P23510 ALOX12P2-203ENST00000570921 1945 ntBASIC13.86□□□□□ -0.19
TNFSF4P23510 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TNFSF4P23510 AC092171.3-201ENST00000610122 2651 ntBASIC13.86□□□□□ -0.19
TNFSF4P23510 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TNFSF4P23510 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TNFSF4P23510 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TNFSF4P23510 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms