Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 AP001282.1-201ENST00000531301 1499 ntBASIC16.33■□□□□ 0.2
HLA-DPA1P20036 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 KRT18P32-201ENST00000424695 1287 ntBASIC16.32■□□□□ 0.2
HLA-DPA1P20036 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 AP006288.1-201ENST00000446065 395 ntBASIC16.32■□□□□ 0.2
HLA-DPA1P20036 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 AL691403.2-201ENST00000618460 490 ntBASIC16.32■□□□□ 0.2
HLA-DPA1P20036 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HLA-DPA1P20036 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 AP3S2-216ENST00000617003 1561 ntBASIC16.31■□□□□ 0.2
HLA-DPA1P20036 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 AC254562.1-201ENST00000417586 456 ntBASIC16.31■□□□□ 0.2
HLA-DPA1P20036 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 AC004967.1-201ENST00000453589 447 ntBASIC16.31■□□□□ 0.2
HLA-DPA1P20036 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms