Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CSN3P07498 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.81□□□□□ -0.36
CSN3P07498 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.81□□□□□ -0.36
CSN3P07498 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CSN3P07498 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.81□□□□□ -0.36
CSN3P07498 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.81□□□□□ -0.36
CSN3P07498 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CSN3P07498 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.81□□□□□ -0.36
CSN3P07498 RPSAP43-201ENST00000402237 625 ntBASIC12.81□□□□□ -0.36
CSN3P07498 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.81□□□□□ -0.36
CSN3P07498 GPX1P2-201ENST00000429271 606 ntBASIC12.81□□□□□ -0.36
CSN3P07498 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.81□□□□□ -0.36
CSN3P07498 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.81□□□□□ -0.36
CSN3P07498 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.81□□□□□ -0.36
CSN3P07498 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.81□□□□□ -0.36
CSN3P07498 AC091167.2-201ENST00000579581 588 ntBASIC12.81□□□□□ -0.36
CSN3P07498 MPDU1-223ENST00000582151 728 ntBASIC12.81□□□□□ -0.36
CSN3P07498 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 AC012569.1-201ENST00000591191 1524 ntBASIC12.81□□□□□ -0.36
CSN3P07498 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CSN3P07498 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.81□□□□□ -0.36
CSN3P07498 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.81□□□□□ -0.36
CSN3P07498 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CSN3P07498 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSN3P07498 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CSN3P07498 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 MIR1233-2-201ENST00000408138 82 ntBASIC12.8□□□□□ -0.36
CSN3P07498 MIR1233-1-201ENST00000408722 82 ntBASIC12.8□□□□□ -0.36
CSN3P07498 HCG4-201ENST00000418983 998 ntBASIC12.8□□□□□ -0.36
CSN3P07498 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.8□□□□□ -0.36
CSN3P07498 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.8□□□□□ -0.36
CSN3P07498 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 AC068137.2-201ENST00000605408 478 ntBASIC12.8□□□□□ -0.36
CSN3P07498 C20orf181-201ENST00000623918 480 ntBASIC12.8□□□□□ -0.36
CSN3P07498 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.8□□□□□ -0.36
CSN3P07498 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.8□□□□□ -0.36
CSN3P07498 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CSN3P07498 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CSN3P07498 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CSN3P07498 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.8□□□□□ -0.36
CSN3P07498 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 SLC22A20-204ENST00000530038 1673 ntBASIC12.8□□□□□ -0.36
CSN3P07498 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSN3P07498 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSN3P07498 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.79□□□□□ -0.36
CSN3P07498 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSN3P07498 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSN3P07498 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.79□□□□□ -0.36
CSN3P07498 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSN3P07498 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSN3P07498 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.79□□□□□ -0.36
CSN3P07498 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSN3P07498 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSN3P07498 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSN3P07498 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms