Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOC3P02656 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC3P02656 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
APOC3P02656 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.99□□□□□ -0.33
APOC3P02656 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC3P02656 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC3P02656 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
APOC3P02656 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC3P02656 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
APOC3P02656 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.99□□□□□ -0.33
APOC3P02656 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC3P02656 AC092368.3-202ENST00000574180 1591 ntBASIC12.98□□□□□ -0.33
APOC3P02656 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 CICP16-201ENST00000502609 2813 ntBASIC12.98□□□□□ -0.33
APOC3P02656 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
APOC3P02656 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC3P02656 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 AL356441.2-201ENST00000443009 864 ntBASIC12.98□□□□□ -0.33
APOC3P02656 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.98□□□□□ -0.33
APOC3P02656 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.98□□□□□ -0.33
APOC3P02656 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.98□□□□□ -0.33
APOC3P02656 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC3P02656 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 AC092127.1-201ENST00000567093 3455 ntBASIC12.98□□□□□ -0.33
APOC3P02656 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC3P02656 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC3P02656 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC3P02656 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
APOC3P02656 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
APOC3P02656 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOC3P02656 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOC3P02656 AC105206.1-202ENST00000314927 2368 ntBASIC12.97□□□□□ -0.33
APOC3P02656 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
APOC3P02656 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.97□□□□□ -0.33
APOC3P02656 POU5F1P6-201ENST00000466990 990 ntBASIC12.97□□□□□ -0.33
APOC3P02656 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.97□□□□□ -0.33
APOC3P02656 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.97□□□□□ -0.33
APOC3P02656 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC3P02656 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC3P02656 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.97□□□□□ -0.33
APOC3P02656 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms