Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RARRES2P9-201ENST00000565168 469 ntBASIC16.97■□□□□ 0.31
APOEP02649 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.97■□□□□ 0.31
APOEP02649 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.97■□□□□ 0.31
APOEP02649 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.97■□□□□ 0.31
APOEP02649 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
APOEP02649 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOEP02649 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
APOEP02649 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.97■□□□□ 0.31
APOEP02649 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
APOEP02649 AP3S2-216ENST00000617003 1561 ntBASIC16.97■□□□□ 0.31
APOEP02649 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOEP02649 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOEP02649 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOEP02649 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
APOEP02649 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.96■□□□□ 0.31
APOEP02649 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
APOEP02649 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.96■□□□□ 0.31
APOEP02649 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.96■□□□□ 0.31
APOEP02649 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
APOEP02649 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 CNN2P2-201ENST00000443536 909 ntBASIC16.96■□□□□ 0.31
APOEP02649 CNN2P3-201ENST00000450201 906 ntBASIC16.96■□□□□ 0.31
APOEP02649 AL512356.2-201ENST00000546955 174 ntBASIC16.96■□□□□ 0.31
APOEP02649 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.96■□□□□ 0.31
APOEP02649 AC024267.1-201ENST00000582320 895 ntBASIC16.96■□□□□ 0.31
APOEP02649 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.96■□□□□ 0.31
APOEP02649 MIR6080-201ENST00000617359 66 ntBASIC16.96■□□□□ 0.31
APOEP02649 AL136317.3-201ENST00000618497 906 ntBASIC16.96■□□□□ 0.31
APOEP02649 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.96■□□□□ 0.31
APOEP02649 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.96■□□□□ 0.31
APOEP02649 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOEP02649 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
APOEP02649 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
APOEP02649 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
APOEP02649 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
APOEP02649 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
APOEP02649 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.96■□□□□ 0.3
APOEP02649 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.96■□□□□ 0.3
APOEP02649 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
APOEP02649 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.96■□□□□ 0.3
APOEP02649 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.95■□□□□ 0.3
APOEP02649 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
APOEP02649 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
APOEP02649 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
APOEP02649 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.95■□□□□ 0.3
APOEP02649 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.95■□□□□ 0.3
APOEP02649 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
APOEP02649 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
APOEP02649 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOEP02649 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.94■□□□□ 0.3
APOEP02649 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
APOEP02649 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.94■□□□□ 0.3
APOEP02649 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOEP02649 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOEP02649 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.94■□□□□ 0.3
APOEP02649 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOEP02649 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.94■□□□□ 0.3
APOEP02649 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
APOEP02649 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOEP02649 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
APOEP02649 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
APOEP02649 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.94■□□□□ 0.3
APOEP02649 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.94■□□□□ 0.3
APOEP02649 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms