Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 KRT18P43-201ENST00000469825 1281 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 RNA5SP486-201ENST00000515961 83 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 AC015910.1-201ENST00000579400 975 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 U62317.3-201ENST00000608319 855 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 AC135050.7-201ENST00000624508 2218 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 AC004408.2-201ENST00000623613 2777 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALDH1A1P00352 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALDH1A1P00352 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALDH1A1P00352 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALDH1A1P00352 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALDH1A1P00352 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALDH1A1P00352 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 CHMP4BP1-201ENST00000556017 588 ntBASIC18.19■□□□□ 0.5
ALDH1A1P00352 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 AC006453.4-201ENST00000636949 1252 ntBASIC18.19■□□□□ 0.5
ALDH1A1P00352 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALDH1A1P00352 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALDH1A1P00352 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ALDH1A1P00352 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 MIR1202-201ENST00000408529 83 ntBASIC18.18■□□□□ 0.5
ALDH1A1P00352 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.18■□□□□ 0.5
ALDH1A1P00352 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 AC126915.1-201ENST00000522847 1038 ntBASIC18.18■□□□□ 0.5
ALDH1A1P00352 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 AL096828.3-201ENST00000615354 462 ntBASIC18.18■□□□□ 0.5
ALDH1A1P00352 AC091812.3-201ENST00000621362 345 ntBASIC18.18■□□□□ 0.5
ALDH1A1P00352 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 LETM1P2-201ENST00000597330 2178 ntBASIC18.18■□□□□ 0.5
ALDH1A1P00352 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALDH1A1P00352 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ALDH1A1P00352 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.17■□□□□ 0.5
ALDH1A1P00352 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
ALDH1A1P00352 DRD5P1-201ENST00000456605 1438 ntBASIC18.17■□□□□ 0.5
ALDH1A1P00352 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ALDH1A1P00352 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.17■□□□□ 0.5
ALDH1A1P00352 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.17■□□□□ 0.5
ALDH1A1P00352 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 AP001582.1-201ENST00000525856 295 ntBASIC18.17■□□□□ 0.5
ALDH1A1P00352 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms