Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AP000842.3-202ENST00000569238 1080 ntBASIC16.19■□□□□ 0.18
CFAP99D6REC4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 SPTSSB-204ENST00000617024 1292 ntBASIC16.19■□□□□ 0.18
CFAP99D6REC4 AC055717.3-201ENST00000622967 595 ntBASIC16.19■□□□□ 0.18
CFAP99D6REC4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AC134684.3-201ENST00000641758 218 ntBASIC16.19■□□□□ 0.18
CFAP99D6REC4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 AL592424.1-201ENST00000563624 1536 ntBASIC16.19■□□□□ 0.18
CFAP99D6REC4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFAP99D6REC4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CFAP99D6REC4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 AC007950.2-201ENST00000615045 2347 ntBASIC16.18■□□□□ 0.18
CFAP99D6REC4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 AC004461.1-201ENST00000412461 403 ntBASIC16.18■□□□□ 0.18
CFAP99D6REC4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 AC069335.1-201ENST00000489972 472 ntBASIC16.18■□□□□ 0.18
CFAP99D6REC4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 LINC01225-203ENST00000563550 1244 ntBASIC16.18■□□□□ 0.18
CFAP99D6REC4 RN7SL275P-201ENST00000582762 335 ntBASIC16.18■□□□□ 0.18
CFAP99D6REC4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 AC006449.6-201ENST00000612330 2296 ntBASIC16.18■□□□□ 0.18
CFAP99D6REC4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms