Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 PAWRP1-201ENST00000451083 565 ntBASIC15.35■□□□□ 0.05
AP4S1Q9Y587 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 AC011498.5-201ENST00000592027 486 ntBASIC15.35■□□□□ 0.05
AP4S1Q9Y587 TMEM191A-211ENST00000637163 1067 ntBASIC15.35■□□□□ 0.05
AP4S1Q9Y587 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 AC105250.1-201ENST00000509378 2057 ntBASIC15.35■□□□□ 0.05
AP4S1Q9Y587 AC139749.1-202ENST00000617529 3139 ntBASIC15.35■□□□□ 0.05
AP4S1Q9Y587 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4S1Q9Y587 SLC22A20-204ENST00000530038 1673 ntBASIC15.35■□□□□ 0.05
AP4S1Q9Y587 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 RCN1P2-201ENST00000398357 915 ntBASIC15.34■□□□□ 0.05
AP4S1Q9Y587 PMS2P1-201ENST00000431037 1228 ntBASIC15.34■□□□□ 0.05
AP4S1Q9Y587 KRT8P26-201ENST00000534154 1276 ntBASIC15.34■□□□□ 0.05
AP4S1Q9Y587 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP4S1Q9Y587 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
AP4S1Q9Y587 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.33■□□□□ 0.05
AP4S1Q9Y587 U82695.1-201ENST00000635752 1889 ntBASIC15.33■□□□□ 0.05
AP4S1Q9Y587 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4S1Q9Y587 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.33■□□□□ 0.05
AP4S1Q9Y587 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4S1Q9Y587 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4S1Q9Y587 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.33■□□□□ 0.05
AP4S1Q9Y587 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AP4S1Q9Y587 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 AC079776.2-201ENST00000641154 1609 ntBASIC15.33■□□□□ 0.04
AP4S1Q9Y587 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4S1Q9Y587 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms